DBNascent | Datasets

Chen2016cutoff

**Samples in dataset (Table view)**
SRR3476588
SRR3476589

**Downloads (all samples in dataset)**
TDFs (visualization files)	Zip archive	32 Mb
Read counts and bidirectional calls	Zip archive	534 Kb

**Paper Details**
SRP accession	SRP074388
GEO accession	GSE81090
Protocol	GRO-seq
Organisms	D. melanogaster
Library Prep	random primed
Spike-in
Published	Yes
Year	2016
First Author	Chen
Last Author	Aravin
DOI	10.1016/j.molcel.2016.05.010
Full citation	Yung-Chia Ariel Chen, Evelyn Stuwe, Yicheng Luo, Maria Ninova, Adrien Le Thomas, Ekaterina Rozhavskaya, Sisi Li, Sivani Vempati, John D. Laver, Dinshaw J. Patel, Craig A. Smibert, Howard D. Lipshitz, Katalin Fejes Toth, and Alexei A. Aravin. Cutoff suppresses RNA polymerase II termination to ensure expression of piRNA precursors. Mol Cell, 63(1):97-109, Jul 2016.
Median QC score	5.0
ATAC-seq?	No
RNA-seq?	Yes
ChIP-seq?	Yes
3D Seq?	No
Other Seq?	No