DBNascent | Datasets

Escoubet-lozach2011mechanisms

**Samples in dataset (Table view)**
SRR065240
SRR065241

**Downloads (all samples in dataset)**
TDFs (visualization files)	Zip archive	54 Mb
Read counts and bidirectional calls	Zip archive	12 Mb

**Paper Details**
SRP accession	SRP003475
GEO accession	GSE23619
Protocol	GRO-seq
Organisms	M. musculus
Library Prep	circularization
Spike-in
Published	Yes
Year	2011
First Author	Escoubet-Lozach
Last Author	Glass
DOI	10.1371/journal.pgen.1002401
Full citation	Laure Escoubet-Lozach, Christopher Benner, Minna U. Kaikkonen, Jean Lozach, Sven Heinz, Nathan J. Spann, Andrea Crotti, Josh Stender, Serena Ghisletti, Donna Reichart, Christine S. Cheng, Rosa Luna, Colleen Ludka, Roman Sasik, Ivan Garcia-Bassets, Alexander Hoffmann, Shankar Subramaniam, Gary Hardiman, Michael G. Rosenfeld, and Christopher K. Glass. Mechanisms establishing TLR4-responsive activation states of inflammatory response genes. PLoS Genet, 7(12):e1002401, Dec 2011.
Median QC score	4.0
ATAC-seq?	No
RNA-seq?	Yes
ChIP-seq?	Yes
3D Seq?	No
Other Seq?	No