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Paper Details
Johnson2017biotin
| SRR3679879 |
| SRR3679880 |
| SRR3679881 |
| SRR3679882 |
| TDFs (visualization files) | Zip archive | 651 Mb |
| Read counts and bidirectional calls | Zip archive | 30 Mb |
| SRP accession | SRP076710 |
| GEO accession | GSE83474 |
| Protocol | GRO-seq |
| Organisms | M. musculus |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2017 |
| First Author | Johnson |
| Last Author | Zhou |
| DOI | 10.1038/nm.4406 |
| Full citation | Brian S. Johnson, Ying-Tao Zhao, Maria Fasolino, Janine M. Lamonica, Yoon Jung Kim, George Georgakilas, Kathleen H. Wood, Daniel Bu, Yue Cui, Darren Goffin, Golnaz Vahedi, Tae Hoon Kim, and Zhaolan Zhou. Biotin tagging of MECP2 in mice reveals contextual insights into the Rett syndrome transcriptome. Nature Medicine, 23(10):1203-1214, Oct 2017. |
|
Median QC score
|
2.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |