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Paper Details
Liu2018rna-directed
| TDFs (visualization files) | Zip archive | 2.3 Gb |
| Read counts and bidirectional calls | Zip archive |
| SRP accession | SRP109129 , SRP126767 |
| GEO accession | GSE100010 , GSE108078 |
| Protocol | GRO-seq |
| Organisms | A. thaliana |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2018 |
| First Author | Liu |
| Last Author | Jacobsen |
| DOI | 10.1038/s41477-017-0100-y |
| Full citation | Wanlu Liu, Sascha H. Duttke, Jonathan Hetzel, Martin Groth, Suhua Feng, Javier Gallego-Bartolome, Zhenhui Zhong, Hsuan Yu Kuo, Zonghua Wang, Jixian Zhai, Joanne Chory, and Steven E. Jacobsen. RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis. Nature Plants, 4(3):181-188, 2018. |
|
Median QC score
|
2.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |