Explore DBNascent | browse or search sample metadata
Search
All Samples
Samples By Dataset
Advanced Search
Paper Details
Mukai2020chromatin
| TDFs (visualization files) | Zip archive | 1.4 Gb |
| Read counts and bidirectional calls | Zip archive |
| SRP accession | SRP261959 |
| GEO accession | GSE150705 |
| Protocol | ChRO-seq |
| Organisms | C. lupus familiaris |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2020 |
| First Author | Mukai |
| Last Author | Coonrod |
| DOI | 10.1186/s12917-020-02395-3 |
| Full citation | Chinatsu Mukai, Eunju Choi, Kelly L. Sams, Elena Zu Klampen, Lynne Anguish, Brooke A. Marks, Edward J. Rice, Zhong Wang, Lauren A. Choate, Shao-Pei Chou, Yukinari Kato, Andrew D. Miller, Charles G. Danko, and Scott A. Coonrod. Chromatin run-on sequencing analysis finds that ECM remodeling plays an important role in canine hemangiosarcoma pathogenesis. BMC Veterinary Research, 16:206, Jun 2020. |
|
Median QC score
|
4.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |