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Paper Details
Park2020global
SRR11314417 |
SRR11314418 |
TDFs (visualization files) | Zip archive | 267 Mb |
Read counts and bidirectional calls | Zip archive | 18 Mb |
SRP accession | SRP252991 |
GEO accession | GSE147063 |
Protocol | GRO-seq |
Organisms | H. sapiens |
Library Prep | circularization |
Spike-in | |
Published | Yes |
Year | 2020 |
First Author | Park |
Last Author | Jung |
DOI | 10.1073/pnas.1922216117 |
Full citation | Angela Park, Soohwan Oh, Kyle L. Jung, Un Yung Choi, Hye-Ra Lee, Michael G. Rosenfeld, and Jae U. Jung. Global epigenomic analysis of KSHV-infected primary effusion lymphoma identifies functional MYC superenhancers and enhancer RNAs. Proceedings of the National Academy of Sciences, 117(35):21618-21627, 2020. |
Median QC score
|
1.5 |
ATAC-seq? | No |
RNA-seq? | No |
ChIP-seq? | Yes |
3D Seq? | Yes |
Other Seq? | No |