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Rao2017cohesin
| All metadata | TXT | 20 Kb |
| TDFs (visualization files) | ZIP archive | 4.0 Gb |
| Read counts and bidirectional calls | ZIP archive | 141 Mb |
| SRP accession | SRP124968 |
| GEO accession | GSE106886 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2017 |
| First Author | Rao |
| Last Author | Aiden |
| DOI | 10.1016/j.cell.2017.09.026 |
| Full citation | Suhas S.P. Rao, Su-Chen Huang, Brian Glenn St Hilaire, Jesse M. Engreitz, Elizabeth M. Perez, Kyong-Rim Kieffer-Kwon, Adrian L. Sanborn, Sarah E. Johnstone, Gavin D. Bascom, Ivan D. Bochkov, Xingfan Huang, Muhammad S. Shamim, Jaeweon Shin, Douglass Turner, Ziyi Ye, Arina D. Omer, James T. Robinson, Tamar Schlick, Bradley E. Bernstein, Rafael Casellas, Eric S. Lander, and Erez Lieberman Aiden. Cohesin loss eliminates all loop domains. Cell, 171(2):305-320.e24, Oct 2017. |
|
Median QC score
|
1.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | Yes |
| 3D Seq? | Yes |
| Other Seq? | No |