DBNascent | Datasets

Soccio2015genetic

**Samples in dataset (Table view)**
SRR1732573

**Downloads (all samples in dataset)**
TDFs (visualization files)	Zip archive	55 Mb
Read counts and bidirectional calls	Zip archive	7 Mb

**Paper Details**
SRP accession	SRP051500
GEO accession	GSE64459
Protocol	GRO-seq
Organisms	M. musculus
Library Prep	not noted in GEO or publication
Spike-in
Published	Yes
Year	2015
First Author	Soccio
Last Author	Lazar
DOI	10.1016/j.cell.2015.06.025
Full citation	Raymond E. Soccio, Eric R. Chen, Satyajit R. Rajapurkar, Pegah Safabakhsh, Jill M. Marinis, Joanna R. Dispirito, Matthew J. Emmett, Erika R. Briggs, Bin Fang, Logan J. Everett, Hee-Woong Lim, Kyoung-Jae Won, David J. Steger, Ying Wu, Mete Civelek, Benjamin F. Voight, and Mitchell A. Lazar. Genetic variation determines PPAR-gamma function and anti-diabetic drug response in vivo. Cell, 162(1):33-44, Jul 2015.
Median QC score	3.0
ATAC-seq?	No
RNA-seq?	Yes
ChIP-seq?	Yes
3D Seq?	No
Other Seq?	No