DBNascent | Samples

SRR7266931,SRR7266932,SRR7266933,...

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR7266931	29	Aho2019displacement	PRO-seq	ligation	control	True	1	1
SRR7266932	30	Aho2019displacement	PRO-seq	ligation	control	True	2	2
SRR7266933	31	Aho2019displacement	PRO-seq	ligation	experimental	False	1	1
SRR7266934	32	Aho2019displacement	PRO-seq	ligation	experimental	False	1	2
SRR7266935	33	Aho2019displacement	PRO-seq	ligation	experimental	False	1	1
SRR7266936	34	Aho2019displacement	PRO-seq	ligation	experimental	False	1	2
SRR7266937	35	Aho2019displacement	PRO-seq	ligation	experimental	False	1	1
SRR7266938	36	Aho2019displacement	PRO-seq	ligation	experimental	False	1	2

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR7266931	H. sapiens	cell line	MV4-11
SRR7266932	H. sapiens	cell line	MV4-11
SRR7266933	H. sapiens	cell line	MV4-11
SRR7266934	H. sapiens	cell line	MV4-11
SRR7266935	H. sapiens	cell line	MV4-11
SRR7266936	H. sapiens	cell line	MV4-11
SRR7266937	H. sapiens	cell line	MV4-11
SRR7266938	H. sapiens	cell line	MV4-11

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR7266931	vehicle	DMSO	-60 min	0 min	1 hr
SRR7266932	vehicle	DMSO	-60 min	0 min	1 hr
SRR7266933	treatment	C3 (36 microM)	-15 min	0 min	15 min
SRR7266934	treatment	C3 (36 microM)	-15 min	0 min	15 min
SRR7266935	treatment	C3 (36 microM)	-30 min	0 min	30 min
SRR7266936	treatment	C3 (36 microM)	-30 min	0 min	30 min
SRR7266937	treatment	C3 (36 microM)	-60 min	0 min	1 hr
SRR7266938	treatment	C3 (36 microM)	-60 min	0 min	1 hr

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR7266931	75	36,189,411	0.39838	0.8191	3.69854	0.69112	1	2
SRR7266932	75	18,573,270	0.32614	0.8069	2.88065	0.69283	2	1
SRR7266933	75	41,087,789	0.43535	0.7895	3.60262	0.68799	1	2
SRR7266934	75	39,172,480	0.38753	0.8234	3.46351	0.71163	1	2
SRR7266935	75	39,951,956	0.39059	0.816	3.61133	0.71284	1	2
SRR7266936	75	35,630,012	0.37848	0.8299	3.63574	0.71142	1	2
SRR7266937	75	40,781,058	0.40753	0.8186	3.62134	0.70478	1	2
SRR7266938	75	31,904,393	0.43755	0.7686	3.92276	0.67936	1	2

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR7266931	30302	11009	13192	5862	26710	8904	11746	5612
SRR7266932	23186	7802	10654	4395	19514	8291	7894	3635
SRR7266933	30552	11226	13349	5776	26527	8518	11611	5681
SRR7266934	30581	11359	13092	5990	27301	8769	12087	5941
SRR7266935	32282	12210	13622	6287	27857	8860	12264	6127
SRR7266936	31007	11780	13136	5983	26186	8675	11380	5605
SRR7266937	30742	10864	13427	6290	28886	9200	12934	6370
SRR7266938	27352	10051	11966	5142	24140	8914	10254	4777