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SRR8482945,SRR8482946,SRR8482947,...
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. |
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR8482945 | 211 | Barucci2020small | PRO-seq | ligation | control | True | 3 | 1 |
| SRR8482946 | 212 | Barucci2020small | PRO-seq | ligation | control | True | 3 | 2 |
| SRR8482947 | 213 | Barucci2020small | PRO-seq | ligation | experimental | False | 4 | 1 |
| SRR8482948 | 214 | Barucci2020small | PRO-seq | ligation | experimental | False | 3 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR8482945 | C. elegans | organism | whole worm | stage adult | N2 | ||
| SRR8482946 | C. elegans | organism | whole worm | stage adult | N2 | ||
| SRR8482947 | C. elegans | organism | whole worm | stage adult | N2 | prg-1 -/- | |
| SRR8482948 | C. elegans | organism | whole worm | stage adult | N2 | prg-1 -/- |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR8482945 | no treatment | None | None | None | |
| SRR8482946 | no treatment | None | None | None | |
| SRR8482947 | no treatment | None | None | None | |
| SRR8482948 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR8482945 | 35 | 16,790,740 | 0.73965 | 0.7971 | 4.09909 | 0.28427 | 3 | 2 |
| SRR8482946 | 35 | 21,303,239 | 0.73612 | 0.8271 | 3.13591 | 0.32523 | 3 | 2 |
| SRR8482947 | 35 | 24,884,278 | 0.88567 | 0.5637 | 6.07638 | 0.16441 | 4 | 3 |
| SRR8482948 | 35 | 24,618,802 | 0.71771 | 0.8367 | 3.25829 | 0.35514 | 3 | 2 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR8482945 | None | None | None | None | None | None | None | None |
| SRR8482946 | None | None | None | None | None | None | None | None |
| SRR8482947 | None | None | None | None | None | None | None | None |
| SRR8482948 | None | None | None | None | None | None | None | None |
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