DBNascent | Samples

SRR6825349,SRR6825350,SRR6825351,...

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR6825349	286	Bonelt2019precocious	GRO-seq	ligation	experimental	False	2	1
SRR6825350	287	Bonelt2019precocious	GRO-seq	ligation	experimental	False	2	1
SRR6825351	288	Bonelt2019precocious	GRO-seq	ligation	experimental	False	2	1
SRR6825352	289	Bonelt2019precocious	GRO-seq	ligation	experimental	False	1	2

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR6825349	M. musculus	primary cell	splenic B cell		C57BL/6	Ebf1 fl/+; Cd23-Cre
SRR6825350	M. musculus	primary cell	splenic B cell		C57BL/6	Ebf1 fl/-; Cd23-Cre
SRR6825351	M. musculus	primary cell	pro B cell		C57BL/6	Rag2 -/-
SRR6825352	M. musculus	primary cell	pro B cell		C57BL/6	Rag2 -/-

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR6825349	treatment	cell sorting CD23+	None	None	None
SRR6825350	treatment	cell sorting CD23+	None	None	None
SRR6825351	treatment	cell sorting CD19+	None	None	None
SRR6825352	treatment	cell sorting CD19+	None	None	None

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR6825349	50	34,051,257	0.5879	0.5509	4.71956	0.46945	2	2
SRR6825350	50	33,006,298	0.56866	0.587	4.24112	0.50385	2	2
SRR6825351	50	30,456,602	0.58959	0.5307	4.18552	0.44487	2	2
SRR6825352	50	34,705,789	0.48889	0.5613	2.89033	0.64328	1	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR6825349	18408	7903	6004	2124	14925	7031	4326	1778
SRR6825350	18905	7539	6358	2848	17052	7623	5287	2481
SRR6825351	13819	5980	4707	989	9878	5261	2410	710
SRR6825352	22129	7924	8159	3786	18787	7451	6414	2979