DBNascent | Samples

SRR1574538,SRR1574539

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR1574538	428	Chen2014gene	GRO-seq	ligation	control	False	3	1
SRR1574539	429	Chen2014gene	GRO-seq	ligation	experimental	False	3	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR1574538	H. sapiens	cell line	ESC	H1			siRNA control
SRR1574539	H. sapiens	cell line	ESC	H1			siRNA Ssu72

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR1574538	no treatment		None	None	None
SRR1574539	no treatment		None	None	None

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR1574538	51	16,049,646	0.58433	0.6115	3.24335	0.4209	3	2
SRR1574539	51	19,203,603	0.61003	0.6034	3.53287	0.40147	3	2

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR1574538	3847	1434	1738	285	1370	757	384	256
SRR1574539	5005	1825	2100	398	2040	1218	540	324