DBNascent | Samples

SRR7010982,SRR7010983,SRR7010984

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR7010982	774	Fei2018ndf	GRO-seq	ligation	control	True	2	1
SRR7010983	775	Fei2018ndf	GRO-seq	ligation	experimental	False	2	1
SRR7010984	776	Fei2018ndf	GRO-seq	ligation	experimental	False	2	2

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR7010982	H. sapiens	cell line	HeLa
SRR7010983	H. sapiens	cell line	HeLa			hNDF -/-
SRR7010984	H. sapiens	cell line	HeLa			hNDF -/-

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR7010982	no treatment		None	None	None
SRR7010983	no treatment		None	None	None
SRR7010984	no treatment		None	None	None

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR7010982	32	63,609,967	0.51336	0.8748	2.84318	0.64527	2	1
SRR7010983	32	76,150,673	0.53629	0.8812	2.9507	0.64316	2	1
SRR7010984	32	65,728,696	0.52907	0.8925	3.08329	0.62602	2	2

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR7010982	36880	9836	16754	10017	33156	8572	15422	9082
SRR7010983	36270	10056	16237	9775	34853	8609	16308	9837
SRR7010984	33712	9587	15404	8558	33130	8891	15697	8596