DBNascent | Samples

SRR12482690,SRR12482691,SRR12482692,...

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR12482690	874	Gally2020gain	PRO-seq	ligation	control	True	2	1
SRR12482691	875	Gally2020gain	PRO-seq	ligation	control	True	2	2
SRR12482692	876	Gally2020gain	PRO-seq	ligation	control	True	3	1
SRR12482693	877	Gally2020gain	PRO-seq	ligation	control	True	2	2
SRR12482694	878	Gally2020gain	PRO-seq	ligation	control	True	2	1
SRR12482695	879	Gally2020gain	PRO-seq	ligation	control	True	2	2

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR12482690	H. sapiens	cell line	A549
SRR12482691	H. sapiens	cell line	A549
SRR12482692	H. sapiens	cell line	BEAS-2B
SRR12482693	H. sapiens	cell line	BEAS-2B
SRR12482694	H. sapiens	cell line	LC-2/ad
SRR12482695	H. sapiens	cell line	LC-2/ad

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR12482690	no treatment		None	None	None
SRR12482691	no treatment		None	None	None
SRR12482692	no treatment		None	None	None
SRR12482693	no treatment		None	None	None
SRR12482694	no treatment		None	None	None
SRR12482695	no treatment		None	None	None

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR12482690	76	123,808,681	0.59652	0.9509	4.01319	0.6691	2	2
SRR12482691	76	125,447,543	0.57845	0.9479	3.97119	0.67019	2	2
SRR12482692	76	75,166,278	0.76849	0.9261	4.53811	0.5966	3	2
SRR12482693	76	131,284,199	0.62643	0.9523	4.00441	0.71889	2	2
SRR12482694	76	138,443,380	0.55872	0.9499	3.96897	0.70571	2	2
SRR12482695	76	118,495,570	0.52744	0.9513	3.82177	0.7085	2	2

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR12482690	56364	21343	18685	16601	50769	9994	21662	17256
SRR12482691	55440	21059	18168	16390	50738	9989	21647	17283
SRR12482692	36723	15361	14625	7216	27218	7786	12208	5634
SRR12482693	46720	17029	16866	12650	42050	7967	20306	11513
SRR12482694	48914	19662	15645	13496	47054	8789	20278	15813
SRR12482695	48302	19726	15613	12792	43895	8770	18871	14243