DBNascent | Samples

SRR620530,SRR620531

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	QC score	Replicate	Outlier?
SRR620530	1001	Hu2012dicer	GRO-seq	circularization	control	4	1	No
SRR620531	1002	Hu2012dicer	GRO-seq	circularization	experimental	1	1	No

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR620530	H. sapiens	cell line	NTera2/D1
SRR620531	H. sapiens	cell line	NTera2/D1

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR620530	no treatment		None	None	None
SRR620531	treatment	retinoic acid (1 microM)	-2 day	0 day	2 day

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR620530	48	8,804,069	0.63267	0.733	2.9375	0.33778	4	1
SRR620531	48	28,748,492	0.3544	0.8314	2.1024	0.72362	1	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR620530	7326	3246	2784	1099	4123	2499	1030	724
SRR620531	25029	8348	10471	5968	17493	6749	6543	4350