DBNascent | Samples

SRR6927837,SRR6927838,SRR6927839

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR6927837	1522	Liang2018targeting	PRO-seq	ligation	experimental	False	1	1
SRR6927838	1523	Liang2018targeting	PRO-seq	ligation	experimental	False	1	1
SRR6927839	1524	Liang2018targeting	PRO-seq	ligation	control	True	1	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR6927837	H. sapiens	cell line	HEK293T
SRR6927838	H. sapiens	cell line	HEK293T
SRR6927839	H. sapiens	cell line	HEK293T

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR6927837	treatment	KL-2 (20 microM)	-6 hr	0 hr	6 hr
SRR6927838	treatment	KL-1 (20 microM)	-6 hr	0 hr	6 hr
SRR6927839	vehicle	DMSO	-6 hr	0 hr	6 hr

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR6927837	20	37,860,870	0.3476	0.8295	4.02132	0.77389	1	2
SRR6927838	20	36,018,578	0.40072	0.8777	4.05714	0.70068	1	2
SRR6927839	20	43,221,197	0.35575	0.9079	3.45305	0.74044	1	2

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR6927837	21886	12843	8690	1455	18744	8558	8019	2120
SRR6927838	27007	16166	9804	2233	19888	9844	7969	2485
SRR6927839	37814	21907	12365	4848	23880	10082	9157	4421