DBNascent | Samples

SRZ543417,SRZ543419

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRZ543417	1525	Lin2012global	GRO-seq	ligation	control	False	2	1
SRZ543419	1526	Lin2012global	GRO-seq	ligation	control	False	3	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRZ543417	M. musculus	primary cell	pre pro B cell		C57BL/6	Tcf3 -/-
SRZ543419	M. musculus	primary cell	pro B cell		C57BL/6	Rag1 -/-

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRZ543417	no treatment		None	None	None
SRZ543419	no treatment		None	None	None

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRZ543417	50	64,785,523	0.58713	0.5512	3.49144	0.48454	2	2
SRZ543419	50	87,826,925	0.6646	0.606	3.99671	0.41756	3	2

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRZ543417	11769	4453	4177	1374	12161	4041	3990	2432
SRZ543419	14950	5773	5303	1844	14476	4435	5055	3133