DBNascent | Samples

SRR5799635,SRR5799636

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR5799635	1942	Nilson2017oxidative	PRO-seq	ligation	control	True	1	1
SRR5799636	1943	Nilson2017oxidative	PRO-seq	ligation	experimental	False	2	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR5799635	H. sapiens	cell line	HeLa
SRR5799636	H. sapiens	cell line	HeLa

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR5799635	vehicle	DMSO (0.1%)	-1 hr	0 hr	1 hr
SRR5799636	treatment	flavopiridol (1 microM)	-1 hr	0 hr	1 hr

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR5799635	151	48,897,566	0.46144	0.6588	3.00453	0.50716	1	2
SRR5799636	151	41,002,902	0.55403	0.7454	5.02413	0.35218	2	3

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR5799635	26316	12316	10013	4406	19080	9100	7092	3202
SRR5799636	20723	10323	8646	2604	21395	10042	9015	3053