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Downloads

Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
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Technical details

Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR12699328	2222	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	1
SRR12699329	2223	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	2
SRR12699330	2224	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	1
SRR12699331	2225	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	2
SRR12699332	2226	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	1
SRR12699333	2227	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	2
SRR12699334	2228	Schick2021acute	PRO-seq	not noted in GEO or publication	control	True	1	1
SRR12699335	2229	Schick2021acute	PRO-seq	not noted in GEO or publication	control	True	1	2
SRR12699336	2230	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	1
SRR12699337	2231	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	2
SRR12699338	2232	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	1
SRR12699339	2233	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	2
SRR12699340	2234	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	1
SRR12699341	2235	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	2
SRR12699342	2236	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	3	1
SRR12699343	2237	Schick2021acute	PRO-seq	not noted in GEO or publication	experimental	False	1	2

Cellular details

Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR12699328	H. sapiens	cell line	HAP1
SRR12699329	H. sapiens	cell line	HAP1
SRR12699330	H. sapiens	cell line	HAP1
SRR12699331	H. sapiens	cell line	HAP1
SRR12699332	H. sapiens	cell line	HAP1
SRR12699333	H. sapiens	cell line	HAP1
SRR12699334	H. sapiens	cell line	HAP1
SRR12699335	H. sapiens	cell line	HAP1
SRR12699336	H. sapiens	cell line	HAP1			Smarca4 dTAG-inducible degron
SRR12699337	H. sapiens	cell line	HAP1			Smarca4 dTAG-inducible degron
SRR12699338	H. sapiens	cell line	HAP1			Smarca4 dTAG-inducible degron
SRR12699339	H. sapiens	cell line	HAP1			Smarca4 dTAG-inducible degron
SRR12699340	H. sapiens	cell line	HAP1			Smarca4 -/-; Smarca2 dTAG-inducible degron
SRR12699341	H. sapiens	cell line	HAP1			Smarca4 -/-; Smarca2 dTAG-inducible degron
SRR12699342	H. sapiens	cell line	HAP1			Smarca4 -/-; Smarca2 dTAG-inducible degron
SRR12699343	H. sapiens	cell line	HAP1			Smarca4 -/-; Smarca2 dTAG-inducible degron

Conditions

Sample name	Condition type	Treatment	Start time	End time	Duration
SRR12699328	treatment	BRM014 (1 microM)	-10 min	0 min	10 min
SRR12699329	treatment	BRM014 (1 microM)	-10 min	0 min	10 min
SRR12699330	treatment	BRM014 (1 microM)	-1 hr	0 hr	1 hr
SRR12699331	treatment	BRM014 (1 microM)	-1 hr	0 hr	1 hr
SRR12699332	treatment	BRM014 (1 microM)	-30 min	0 min	30 min
SRR12699333	treatment	BRM014 (1 microM)	-30 min	0 min	30 min
SRR12699334	vehicle	DMSO	-1 hr	0 hr	1 hr
SRR12699335	vehicle	DMSO	-1 hr	0 hr	1 hr
SRR12699336	vehicle	DMSO	-3 hr	0 hr	3 hr
SRR12699337	vehicle	DMSO	-3 hr	0 hr	3 hr
SRR12699338	treatment	dTAG47 (300 nM)	-3 hr	0 hr	3 hr
SRR12699339	treatment	dTAG47 (300 nM)	-3 hr	0 hr	3 hr
SRR12699340	vehicle	DMSO	-3 hr	0 hr	3 hr
SRR12699341	vehicle	DMSO	-3 hr	0 hr	3 hr
SRR12699342	treatment	dTAG47 (300 nM)	-3 hr	0 hr	3 hr
SRR12699343	treatment	dTAG47 (300 nM)	-3 hr	0 hr	3 hr

Sample metrics

Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR12699328	13	30,035,527	0.21486	0.9803	3.0741	0.87845	1	2
SRR12699329	12	47,385,373	0.31385	0.9832	3.64027	0.85653	1	2
SRR12699330	13	43,491,514	0.26011	0.9814	3.03741	0.88529	1	2
SRR12699331	13	22,785,776	0.22868	0.9825	3.40119	0.84952	1	2
SRR12699332	12	39,190,936	0.25505	0.9809	3.00224	0.87837	1	2
SRR12699333	12	36,072,298	0.27637	0.983	3.55949	0.85364	1	2
SRR12699334	13	68,236,282	0.32375	0.9811	3.18934	0.88362	1	2
SRR12699335	13	32,679,121	0.26182	0.9826	3.53246	0.85734	1	2
SRR12699336	12	36,022,796	0.25894	0.979	3.7248	0.85642	1	2
SRR12699337	12	42,373,218	0.28575	0.984	3.81813	0.86179	1	2
SRR12699338	12	120,649,243	0.42719	0.9829	3.97882	0.85977	1	2
SRR12699339	12	50,058,872	0.30639	0.9837	3.66788	0.86575	1	2
SRR12699340	12	56,737,168	0.28956	0.9807	3.1815	0.88896	1	2
SRR12699341	12	39,974,655	0.26716	0.9837	3.48858	0.87148	1	2
SRR12699342	13	40,080,484	0.71505	0.9812	2.70253	0.58416	3	1
SRR12699343	12	34,669,398	0.2425	0.9825	3.33058	0.87577	1	2

Bidirectionals

Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR12699328	29344	15541	10073	4360	18013	7605	6674	2893
SRR12699329	30072	14705	10483	5131	19296	7070	7765	3516
SRR12699330	29131	16341	9380	3926	17814	7666	6658	2714
SRR12699331	25879	13616	9381	3317	14410	7025	5089	1817
SRR12699332	29229	16368	9399	4242	18273	7801	6749	2973
SRR12699333	28158	13832	10138	4468	16772	6842	6522	2715
SRR12699334	32369	17112	10294	5560	22762	7672	9434	4596
SRR12699335	27473	13483	10280	4206	17696	7340	7244	2623
SRR12699336	30524	18564	9386	3959	19870	9241	7473	2908
SRR12699337	30680	16674	10717	3940	18433	7364	7345	2776
SRR12699338	34548	21529	9421	5102	25297	8851	10258	5206
SRR12699339	29845	16534	9874	4383	19129	7416	7482	3232
SRR12699340	29750	16852	9322	4273	18970	7450	7544	2937
SRR12699341	30273	16582	10224	3973	17772	7441	6837	2531
SRR12699342	30006	8920	15606	3777	18225	7601	7635	2222
SRR12699343	27223	14927	9198	3748	17143	7519	6546	2357