DBNascent | Samples

SRR1873284,SRR1873285

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR1873284	2444	Telese2015lrp8	GRO-seq	circularization	control	True	2	1
SRR1873285	2445	Telese2015lrp8	GRO-seq	circularization	experimental	False	3	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR1873284	M. musculus	primary cell	cortical neuron
SRR1873285	M. musculus	primary cell	cortical neuron

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR1873284	no treatment		None	None	None
SRR1873285	treatment	reelin (10 nM)	-1 hr	0 hr	1 hr

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR1873284	50	89,204,346	0.57594	0.7591	2.21838	0.5996	2	1
SRR1873285	50	83,704,508	0.65468	0.726	2.44274	0.52468	3	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR1873284	28414	9320	9998	6163	27838	7500	11326	7252
SRR1873285	20536	8060	7294	2752	21034	6941	8352	4204