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SRR2129939,SRR2129940,SRR2129941,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR2129939 | 2738 | Yu2015panoramix | GRO-seq | circularization | control | False | 5 | 1 |
| SRR2129940 | 2739 | Yu2015panoramix | GRO-seq | circularization | control | False | 5 | 2 |
| SRR2129941 | 2740 | Yu2015panoramix | GRO-seq | circularization | experimental | False | 5 | 1 |
| SRR2129942 | 2741 | Yu2015panoramix | GRO-seq | circularization | experimental | False | 5 | 2 |
| SRR2129943 | 2742 | Yu2015panoramix | GRO-seq | circularization | experimental | False | 5 | 1 |
| SRR2129944 | 2743 | Yu2015panoramix | GRO-seq | circularization | experimental | False | 5 | 2 |
| SRR2129945 | 2744 | Yu2015panoramix | GRO-seq | circularization | control | False | 5 | 1 |
| SRR2129946 | 2745 | Yu2015panoramix | GRO-seq | circularization | control | False | 5 | 2 |
| SRR2129947 | 2746 | Yu2015panoramix | GRO-seq | circularization | experimental | False | 5 | 1 |
| SRR2129948 | 2747 | Yu2015panoramix | GRO-seq | circularization | experimental | False | 5 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR2129939 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA white knock-in | |||
| SRR2129940 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA white knock-in | |||
| SRR2129941 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA piwi knock-in | |||
| SRR2129942 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA piwi knock-in | |||
| SRR2129943 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA CG9754 knock-in | |||
| SRR2129944 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA CG9754 knock-in | |||
| SRR2129945 | D. melanogaster | tissue | ovary | luciferase knock-in | |||
| SRR2129946 | D. melanogaster | tissue | ovary | luciferase knock-in | |||
| SRR2129947 | D. melanogaster | tissue | ovary | lambda-N-CG9754 luciferase knock-in | |||
| SRR2129948 | D. melanogaster | tissue | ovary | lambda-N-CG9754 luciferase knock-in |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR2129939 | no treatment | None | None | None | |
| SRR2129940 | no treatment | None | None | None | |
| SRR2129941 | no treatment | None | None | None | |
| SRR2129942 | no treatment | None | None | None | |
| SRR2129943 | no treatment | None | None | None | |
| SRR2129944 | no treatment | None | None | None | |
| SRR2129945 | no treatment | None | None | None | |
| SRR2129946 | no treatment | None | None | None | |
| SRR2129947 | no treatment | None | None | None | |
| SRR2129948 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR2129939 | 10 | 3,515,302 | 0.64825 | 0.5639 | 1.85973 | 0.12772 | 5 | 1 |
| SRR2129940 | 31 | 2,735,754 | 0.52658 | 0.3141 | 1.94097 | 0.12262 | 5 | 1 |
| SRR2129941 | 10 | 4,706,594 | 0.68985 | 0.5928 | 2.09139 | 0.13218 | 5 | 1 |
| SRR2129942 | 31 | 2,498,851 | 0.51725 | 0.3883 | 2.19453 | 0.12198 | 5 | 1 |
| SRR2129943 | 10 | 4,770,306 | 0.58093 | 0.5989 | 1.68793 | 0.25031 | 5 | 1 |
| SRR2129944 | 31 | 3,215,966 | 0.48918 | 0.4126 | 1.73418 | 0.24627 | 5 | 1 |
| SRR2129945 | 10 | 2,552,834 | 0.48386 | 0.8637 | 1.81028 | 0.33617 | 5 | 1 |
| SRR2129946 | 10 | 457,270 | 0.45385 | 0.699 | 1.40404 | 0.08326 | 5 | 1 |
| SRR2129947 | 10 | 1,920,558 | 0.47782 | 0.7783 | 1.55904 | 0.32778 | 5 | 1 |
| SRR2129948 | 10 | 2,058,797 | 0.49491 | 0.7287 | 1.4512 | 0.29256 | 5 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR2129939 | None | None | None | None | None | None | None | None |
| SRR2129940 | None | None | None | None | None | None | None | None |
| SRR2129941 | None | None | None | None | None | None | None | None |
| SRR2129942 | None | None | None | None | None | None | None | None |
| SRR2129943 | None | None | None | None | None | None | None | None |
| SRR2129944 | None | None | None | None | None | None | None | None |
| SRR2129945 | None | None | None | None | None | None | None | None |
| SRR2129946 | None | None | None | None | None | None | None | None |
| SRR2129947 | None | None | None | None | None | None | None | None |
| SRR2129948 | None | None | None | None | None | None | None | None |
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