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SRR2059423,SRR2059424
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR2059423 | 2756 | Zhang2016regulation | GRO-seq | circularization | control | False | 3 | 1 |
| SRR2059424 | 2757 | Zhang2016regulation | GRO-seq | circularization | experimental | False | 3 | 1 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR2059423 | H. sapiens | cell line | HeLa | siRNA control | |||
| SRR2059424 | H. sapiens | cell line | HeLa | siRNA Yy1 |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR2059423 | no treatment | None | None | None | |
| SRR2059424 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR2059423 | 48 | 56,213,146 | 0.71116 | 0.3025 | 4.66055 | 0.31663 | 3 | 2 |
| SRR2059424 | 48 | 85,232,771 | 0.69737 | 0.5014 | 5.64384 | 0.39566 | 3 | 3 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR2059423 | 13572 | 6460 | 5485 | 1453 | 9391 | 5770 | 2730 | 1049 |
| SRR2059424 | 29241 | 13644 | 11898 | 3960 | 21591 | 8558 | 8384 | 3608 |
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