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SRR5816144,SRR5816145
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR5816144 | 2758 | Zhang2017hepatic | GRO-seq | circularization | control | True | 3 | 1 |
| SRR5816145 | 2759 | Zhang2017hepatic | GRO-seq | circularization | experimental | False | 2 | 1 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR5816144 | M. musculus | tissue | liver | ||||
| SRR5816145 | M. musculus | tissue | liver | Rora fl/fl; Rorc fl/fl; AAV-TBG-Cre |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR5816144 | no treatment | None | None | None | |
| SRR5816145 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR5816144 | 44 | 111,853,527 | 0.74866 | 0.5424 | 1.38571 | 0.30971 | 3 | 2 |
| SRR5816145 | 44 | 99,040,067 | 0.54685 | 0.4552 | 2.15794 | 0.54209 | 2 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR5816144 | 18029 | 5976 | 6881 | 3330 | 21888 | 8354 | 8316 | 3724 |
| SRR5816145 | 18701 | 7205 | 6199 | 3921 | 24197 | 8655 | 9542 | 4536 |
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