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SRZ12179472,SRZ12179474
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRZ12179472 | 2888 | Zhu2021calcium | GRO-seq | not noted in GEO or publication | control | False | 3 | 1 |
| SRZ12179474 | 2889 | Zhu2021calcium | GRO-seq | not noted in GEO or publication | experimental | False | 4 | 1 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRZ12179472 | M. musculus | cell line | ECOMG | ||||
| SRZ12179474 | M. musculus | cell line | ECOMG |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRZ12179472 | treatment | neutrophil differentiation protocol | None | None | None |
| SRZ12179474 | treatment | A23187 (5 microM) | -4 hr | 0 hr | 4 hr |
| treatment | neutrophil differentiation protocol | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRZ12179472 | 75 | 37,516,123 | 0.75439 | 0.6952 | 3.7089 | 0.28121 | 3 | 2 |
| SRZ12179474 | 75 | 32,165,029 | 0.82604 | 0.6861 | 3.58759 | 0.19062 | 4 | 2 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRZ12179472 | 12647 | 4967 | 4355 | 1596 | 10330 | 4242 | 3089 | 1908 |
| SRZ12179474 | 5706 | 2082 | 2122 | 382 | 4745 | 1941 | 1411 | 942 |
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