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Czimmerer2018transcription
| SRR6246979 |
| SRR6247018 |
| All metadata | TXT | 3 Kb |
| TDFs (visualization files) | ZIP archive | 52 Mb |
| Read counts and bidirectional calls | ZIP archive | 12 Mb |
| SRP accession | SRP123511 |
| GEO accession | GSE106703 |
| Protocol | GRO-seq |
| Organisms | M. musculus |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2018 |
| First Author | Czimmerer |
| Last Author | Nagy |
| DOI | 10.1016/j.immuni.2017.12.010 |
| Full citation | Zsolt Czimmerer, Bence Daniel, Attila Horvath, Dominik Ruckerl, Gergely Nagy, Mate Kiss, Matthew Peloquin, Marietta M. Budai, Ixchelt Cuaranta-Monroy, Zoltan Simandi, Laszlo Steiner, Bela Nagy, Szilard Poliska, Csaba Banko, Zsolt Bacso, Ira G. Schulman, Sascha Sauer, Jean-Francois Deleuze, Judith E. Allen, Szilvia Benko, and Laszlo Nagy. The transcription factor STAT6 mediates direct repression of inflammatory enhancers and limits activation of alternatively polarized macrophages. Immunity, 48(1):75-90.e6, Jan 2018. |
|
Median QC score
|
4.0 |
| ATAC-seq? | Yes |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |