Fei2018ndf
Downloads (all samples in dataset)
All metadata TXT 4 Kb
TDFs (visualization files) ZIP archive 502 Mb
Read counts and bidirectional calls ZIP archive 27 Mb
Paper Details
SRP accession SRP131467
GEO accession GSE109690
Protocol GRO-seq
Organisms H. sapiens
Library Prep ligation
Spike-in
Published Yes
Year 2018
First Author Fei
Last Author Kadonaga
DOI 10.1101/gad.313973.118
Full citation Jia Fei, Haruhiko Ishii, Marten A. Hoeksema, Franz Meitinger, George A. Kassavetis, Christopher K. Glass, Bing Ren, and James T. Kadonaga. Ndf, a nucleosome-destabilizing factor that facilitates transcription through nucleosomes. Genes and development, 32(9-10):682-694, 2018.
Median QC score
Information
2.0
ATAC-seq? No
RNA-seq? Yes
ChIP-seq? Yes
3D Seq? No
Other Seq? No