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Fleischer2017dna
| SRR5633592 |
| SRR5633593 |
| SRR5633594 |
| SRR5633595 |
| SRR5633596 |
| SRR5633597 |
| SRR5633598 |
| SRR5633599 |
| TDFs (visualization files) | Zip archive | 319 Mb |
| Read counts and bidirectional calls | Zip archive | 63 Mb |
| SRP accession | SRP108366 |
| GEO accession | GSE99508 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2017 |
| First Author | Fleischer |
| Last Author | Kristensen |
| DOI | 10.1038/s41467-017-00510-x |
| Full citation | Thomas Fleischer, Xavier Tekpli, Anthony Mathelier, Shixiong Wang, Daniel Nebdal, Hari P. Dhakal, Kristine Kleivi Sahlberg, Ellen Schlichting, Anne-Lise Borresen-Dale, Elin Borgen, Bjorn Naume, Ragnhild Eskeland, Arnoldo Frigessi, Jorg Tost, Antoni Hurtado, and Vessela N. Kristensen. DNA methylation at enhancers identifies distinct breast cancer lineages. Nature Communications, 8(1):1379, Nov 2017 |
|
Median QC score
|
3.5 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | Yes |