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Gally2020gain
| SRR12482690 |
| SRR12482691 |
| SRR12482692 |
| SRR12482693 |
| SRR12482694 |
| SRR12482695 |
| TDFs (visualization files) | Zip archive | 1.6 Gb |
| Read counts and bidirectional calls | Zip archive | 58 Mb |
| SRP accession | SRP278196 |
| GEO accession | GSE156541 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2020 |
| First Author | Gally |
| Last Author | Gerber |
| DOI | 10.1172/jci.insight.144294 |
| Full citation | Fabienne Gally, Sarah K. Sasse, Jonathan S. Kurche, Margaret A. Gruca, Jonathan H. Cardwell, Tsukasa Okamoto, Hong W. Chu, Xiaomeng Hou, Olivier B. Poirion, Justin Buchanan, Sebastian Preissl, Bing Ren, Sean P. Colgan, Robin D. Dowell, Ivana V. Yang, David A. Schwartz, and Anthony N. Gerber. The MUC5B-associated variant rs35705950 resides within an enhancer subject to lineage- and disease-dependent epigenetic remodeling. JCI Insight, 6(2), Jan 2021. |
|
Median QC score
|
2.0 |
| ATAC-seq? | Yes |
| RNA-seq? | No |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | Yes |