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Paper Details
Korkmaz2019crispr
| SRR8384736 |
| SRR8384737 |
| SRR8384738 |
| TDFs (visualization files) | Zip archive | 299 Mb |
| Read counts and bidirectional calls | Zip archive | 26 Mb |
| SRP accession | SRP175029 |
| GEO accession | GSE124572 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2019 |
| First Author | Korkmaz |
| Last Author | Agami |
| DOI | 10.1093/nar/gkz675 |
| Full citation | Gozde Korkmaz, Zohar Manber, Rui Lopes, Stefan Prekovic, Karianne Schuurman, Yongsoo Kim, Hans Teunissen, Koen Flach, Elzo de Wit, Giorgio G. Galli, et al. A CRISPR-Cas9 screen identifies essential CTCF anchor sites for estrogen receptor-driven breast cancer cell proliferation. Nucleic acids research, 47(18):9557-9572, 2019. |
|
Median QC score
|
1.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |