Lin2012global
Downloads (all samples in dataset)
All metadata TXT 3 Kb
TDFs (visualization files) ZIP archive 192 Mb
Read counts and bidirectional calls ZIP archive 13 Mb
Paper Details
SRP accession SRP014892
GEO accession GSE40173
Protocol GRO-seq
Organisms M. musculus
Library Prep ligation
Spike-in
Published Yes
Year 2012
First Author Lin
Last Author Murre
DOI 10.1038/ni.2432
Full citation Yin C. Lin, Christopher Benner, Robert Mansson, Sven Heinz, Kazuko Miyazaki, Masaki Miyazaki, Vivek Chandra, Claudia Bossen, Christopher K. Glass, and Cornelis Murre. Global changes in the nuclear positioning of genes and intra- and interdomain genomic interactions that orchestrate B cell fate. Nat Immunol, 13(12):1196-204, Dec 2012.
Median QC score
Information
2.5
ATAC-seq? No
RNA-seq? No
ChIP-seq? Yes
3D Seq? Yes
Other Seq? No