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Malinen2017crosstalk
| SRR3728886 |
| SRR3728887 |
| SRR3728888 |
| SRR3728889 |
| SRR3728890 |
| SRR3728891 |
| SRR3728892 |
| SRR3728893 |
| TDFs (visualization files) | Zip archive | 575 Mb |
| Read counts and bidirectional calls | Zip archive | 65 Mb |
| SRP accession | SRP077580 |
| GEO accession | GSE83860 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2017 |
| First Author | Malinen |
| Last Author | Palvimo |
| DOI | 10.1093/nar/gkw855 |
| Full citation | Marjo Malinen, Einari A. Niskanen, Minna U. Kaikkonen, and Jorma J. Palvimo. Crosstalk between androgen and pro-inflammatory signaling remodels androgen receptor and NF-kappaB cistrome to reprogram the prostate cancer cell transcriptome. Nucleic Acids Res, 45(2):619-630, Jan 2017. |
|
Median QC score
|
2.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |