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Paper Details
Patel2020robust
| TDFs (visualization files) | Zip archive | 1.8 Gb |
| Read counts and bidirectional calls | Zip archive | 211 Mb |
| SRP accession | SRP229758 |
| GEO accession | GSE140365 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2020 |
| First Author | Patel |
| Last Author | Grimson |
| DOI | 10.1093/nar/gkaa687 |
| Full citation | Ravi K. Patel, Jessica D. West, Ya Jiang, Elizabeth A. Fogarty, and Andrew Grimson. Robust partitioning of microRNA targets from downstream regulatory changes. Nucleic Acids Research, 48(17):9724-9746, Aug 2020. |
|
Median QC score
|
2.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | Yes |