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Paper Details
Phanstiel2017static
| SRR5359616 |
| SRR5359617 |
| SRR5359618 |
| SRR5359619 |
| TDFs (visualization files) | Zip archive | 100 Mb |
| Read counts and bidirectional calls | Zip archive | 29 Mb |
| SRP accession | SRP102154 |
| GEO accession | GSE96800 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2017 |
| First Author | Phanstiel |
| Last Author | Snyder |
| DOI | 10.1016/j.molcel.2017.08.006 |
| Full citation | Douglas H. Phanstiel, Kevin Van Bortle, Damek Spacek, Gaelen T. Hess, Muhammad Saad Shamim, Ido Machol, Michael I. Love, Erez Lieberman Aiden, Michael C. Bassik, and Michael P. Snyder. Static and dynamic DNA loops form AP-1-bound activation hubs during macrophage development. Molecular Cell, 67(6):1037-1048.e6, 2017. |
|
Median QC score
|
4.0 |
| ATAC-seq? | Yes |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | Yes |
| Other Seq? | No |