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Paper Details
Schick2021acute
| TDFs (visualization files) | Zip archive | 2.6 Gb |
| Read counts and bidirectional calls | Zip archive | 139 Mb |
| SRP accession | SRP255443 |
| GEO accession | GSE148175 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | not noted in GEO or publication |
| Spike-in | |
| Published | Yes |
| Year | 2021 |
| First Author | Schick |
| Last Author | Kubicek |
| DOI | 10.1038/s41588-021-00777-3 |
| Full citation | Sandra Schick, Sarah Grosche, Katharina Eva Kohl, Danica Drpic, Martin G. Jaeger, Nara C. Marella, Hana Imrichova, Jung-Ming G. Lin, Gerald Hofstatter, Michael Schuster, Andre F. Rendeiro, Anna Koren, Mark Petronczki, Christoph Bock, Andre C. Muller, Georg E. Winter, and Stefan Kubicek. Acute BAF perturbation causes immediate changes in chromatin accessibility. Nature Genetics, 53(3):269-278, Mar 2021. |
|
Median QC score
|
1.0 |
| ATAC-seq? | Yes |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |