Wang2011reprogramming
Downloads (all samples in dataset)
All metadata TXT 4 Kb
TDFs (visualization files) ZIP archive 138 Mb
Read counts and bidirectional calls ZIP archive 23 Mb
Paper Details
SRP accession SRP005967
GEO accession GSE27823
Protocol GRO-seq
Organisms H. sapiens
Library Prep circularization
Spike-in
Published Yes
Year 2011
First Author Wang
Last Author Fu
DOI 10.1038/nature10006
Full citation Dong Wang, Ivan Garcia-Bassets, Chris Benner, Wenbo Li, Xue Su, Yiming Zhou, Jinsong Qiu, Wen Liu, Minna U. Kaikkonen, Kenneth A. Ohgi, Christopher K. Glass, Michael G. Rosenfeld, and Xiang-Dong Fu. Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA. Nature, 474(7351):390-394, Jun 2011.
Median QC score
Information
3.0
ATAC-seq? No
RNA-seq? No
ChIP-seq? Yes
3D Seq? No
Other Seq? No