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Paper Details
Zhu2021calcium
| SRZ12179472 |
| SRZ12179474 |
| TDFs (visualization files) | Zip archive | 71 Mb |
| Read counts and bidirectional calls | Zip archive | 12 Mb |
| SRP accession | SRP270993 |
| GEO accession | GSE154051 |
| Protocol | GRO-seq |
| Organisms | M. musculus |
| Library Prep | not noted in GEO or publication |
| Spike-in | |
| Published | Yes |
| Year | 2021 |
| First Author | Zhu |
| Last Author | Murre |
| DOI | 10.1101/gad.343475.120 |
| Full citation | Yina Zhu, Matthew Denholtz, Hanbin Lu, and Cornelis Murre. Calcium signaling instructs NIPBL recruitment at active enhancers and promoters via distinct mechanisms to reconstruct genome compartmentalization. Genes and Development, 35(1-2):65-81, 2021. |
|
Median QC score
|
3.5 |
| ATAC-seq? | Yes |
| RNA-seq? | No |
| ChIP-seq? | Yes |
| 3D Seq? | Yes |
| Other Seq? | No |