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Sample Details

SRR5364303,SRR5364304,SRR5364305,...

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR5364303	643	Dukler2017nascent	PRO-seq	ligation	control	True	1	1
SRR5364304	644	Dukler2017nascent	PRO-seq	ligation	control	True	1	2
SRR5364305	645	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	1
SRR5364306	646	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	2
SRR5364307	647	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	1
SRR5364308	648	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	2
SRR5364309	649	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	1
SRR5364310	650	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	2
SRR5364311	651	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	1
SRR5364312	652	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	2
SRR5364313	653	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	1
SRR5364314	654	Dukler2017nascent	PRO-seq	ligation	experimental	False	1	2

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR5364303	H. sapiens	cell line	K562
SRR5364304	H. sapiens	cell line	K562
SRR5364305	H. sapiens	cell line	K562
SRR5364306	H. sapiens	cell line	K562
SRR5364307	H. sapiens	cell line	K562
SRR5364308	H. sapiens	cell line	K562
SRR5364309	H. sapiens	cell line	K562
SRR5364310	H. sapiens	cell line	K562
SRR5364311	H. sapiens	cell line	K562
SRR5364312	H. sapiens	cell line	K562
SRR5364313	H. sapiens	cell line	K562
SRR5364314	H. sapiens	cell line	K562

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR5364303	vehicle	DMSO	None	None	None
SRR5364304	vehicle	DMSO	None	None	None
SRR5364305	treatment	celastrol (3 microM)	-10 min	0 min	10 min
SRR5364306	treatment	celastrol (3 microM)	-10 min	0 min	10 min
SRR5364307	treatment	celastrol (3 microM)	-20 min	0 min	20 min
SRR5364308	treatment	celastrol (3 microM)	-20 min	0 min	20 min
SRR5364309	treatment	celastrol (3 microM)	-40 min	0 min	40 min
SRR5364310	treatment	celastrol (3 microM)	-40 min	0 min	40 min
SRR5364311	treatment	celastrol (3 microM)	-60 min	0 min	1 hr
SRR5364312	treatment	celastrol (3 microM)	-60 min	0 min	1 hr
SRR5364313	treatment	celastrol (3 microM)	-160 min	0 min	160 min
SRR5364314	treatment	celastrol (3 microM)	-160 min	0 min	160 min

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR5364303	76	31,057,459	0.29351	0.8945	3.68416	0.79316	1	2
SRR5364304	76	32,284,314	0.28976	0.9206	3.54934	0.79433	1	2
SRR5364305	76	30,856,489	0.24897	0.9265	3.60406	0.82915	1	2
SRR5364306	76	28,626,305	0.28518	0.8989	3.74727	0.79632	1	2
SRR5364307	76	28,646,480	0.25057	0.927	3.71182	0.82116	1	2
SRR5364308	76	25,865,034	0.24824	0.9199	3.46425	0.8152	1	2
SRR5364309	76	31,928,378	0.2701	0.9228	3.7607	0.81575	1	2
SRR5364310	76	35,265,409	0.29357	0.929	4.13889	0.80042	1	2
SRR5364311	76	36,406,601	0.27962	0.9266	3.80124	0.8169	1	2
SRR5364312	76	27,779,187	0.33252	0.9097	5.0	0.75019	1	3
SRR5364313	76	34,117,769	0.30681	0.9251	4.26339	0.7837	1	2
SRR5364314	76	36,305,170	0.29529	0.922	4.01294	0.79398	1	2

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR5364303	27144	13485	9761	4603	21866	7812	8981	4482
SRR5364304	26100	13172	9419	4545	23340	8862	9645	4738
SRR5364305	27082	14144	9733	4210	23157	8211	10067	4433
SRR5364306	26022	12937	10043	3864	22158	8403	9659	3929
SRR5364307	27622	14277	9989	4347	23290	8362	10058	4425
SRR5364308	24457	12375	9355	3451	20553	8266	8644	3502
SRR5364309	28416	14594	10339	4531	24798	8610	10733	4958
SRR5364310	29064	14576	10549	4775	25769	8455	11378	5332
SRR5364311	31074	14890	11185	5834	28334	8628	12494	6420
SRR5364312	29694	14763	10934	4970	25166	8873	10610	5103
SRR5364313	37547	16072	13786	8431	31854	9175	13865	8035
SRR5364314	34687	15478	12642	7235	29931	8925	13147	7155