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SRZ3734610,SRZ3734612,SRZ3734614,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRZ3734610 | 671 | Emmett2017histone | GRO-seq | circularization | experimental | False | 3 | 1 |
| SRZ3734612 | 672 | Emmett2017histone | GRO-seq | circularization | experimental | False | 4 | 1 |
| SRZ3734614 | 673 | Emmett2017histone | GRO-seq | circularization | control | False | 2 | 1 |
| SRZ3734617 | 674 | Emmett2017histone | GRO-seq | circularization | experimental | False | 3 | 1 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRZ3734610 | M. musculus | tissue | brown adipose tissue | Hdac3 fl/fl | |||
| SRZ3734612 | M. musculus | tissue | brown adipose tissue | Hdac3 fl/fl; adiponectin-Cre | |||
| SRZ3734614 | M. musculus | tissue | brown adipose tissue | Hdac3 fl/fl | |||
| SRZ3734617 | M. musculus | tissue | brown adipose tissue | Hdac3 fl/fl; adiponectin-Cre |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRZ3734610 | treatment | thermoneutrality (29 Celsius) | -14 day | 0 day | 14 day |
| SRZ3734612 | treatment | thermoneutrality (29 Celsius) | -14 day | 0 day | 14 day |
| SRZ3734614 | no treatment | None | None | None | |
| SRZ3734617 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRZ3734610 | 50 | 242,424,254 | 0.66875 | 0.4849 | 2.90465 | 0.56897 | 3 | 1 |
| SRZ3734612 | 50 | 232,399,446 | 0.83913 | 0.4076 | 1.26647 | 0.24713 | 4 | 1 |
| SRZ3734614 | 50 | 275,569,705 | 0.59488 | 0.5641 | 2.61426 | 0.67697 | 2 | 1 |
| SRZ3734617 | 50 | 243,270,961 | 0.67544 | 0.4277 | 2.06185 | 0.47153 | 3 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRZ3734610 | 33319 | 13340 | 9697 | 8415 | 43869 | 9591 | 19022 | 12512 |
| SRZ3734612 | 24913 | 10182 | 7847 | 5023 | 26882 | 9206 | 10048 | 5917 |
| SRZ3734614 | 34663 | 13831 | 9560 | 9259 | 50333 | 8541 | 22313 | 15969 |
| SRZ3734617 | 27121 | 10646 | 8409 | 6497 | 38465 | 9234 | 16372 | 10286 |
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