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SRR513507,SRR513508,SRR513509,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR513507 | 861 | Fuda2012fcp1 | GRO-seq | circularization | control | False | 5 | 1 |
| SRR513508 | 862 | Fuda2012fcp1 | GRO-seq | circularization | control | False | 4 | 2 |
| SRR513509 | 863 | Fuda2012fcp1 | GRO-seq | circularization | experimental | False | 5 | 1 |
| SRR513510 | 864 | Fuda2012fcp1 | GRO-seq | circularization | experimental | False | 4 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR513507 | D. melanogaster | cell line | S2 | ||||
| SRR513508 | D. melanogaster | cell line | S2 | ||||
| SRR513509 | D. melanogaster | cell line | S2 | ||||
| SRR513510 | D. melanogaster | cell line | S2 |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR513507 | treatment | dsRNA LacZ (10 microg/mL) | -5 day | 0 day | 5 day |
| SRR513508 | treatment | dsRNA LacZ (10 microg/mL) | -5 day | 0 day | 5 day |
| SRR513509 | treatment | dsRNA Fcp1 (10 microg/mL) | -5 day | 0 day | 5 day |
| SRR513510 | treatment | dsRNA Fcp1 (10 microg/mL) | -5 day | 0 day | 5 day |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR513507 | 59 | 2,448,283 | 0.31512 | 0.5127 | 1.22455 | 0.45361 | 5 | 1 |
| SRR513508 | 59 | 7,812,851 | 0.39358 | 0.515 | 1.18934 | 0.49851 | 4 | 1 |
| SRR513509 | 59 | 1,898,176 | 0.30228 | 0.5381 | 1.15194 | 0.4459 | 5 | 1 |
| SRR513510 | 59 | 10,314,808 | 0.44728 | 0.466 | 1.14956 | 0.46585 | 4 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR513507 | None | None | None | None | None | None | None | None |
| SRR513508 | None | None | None | None | None | None | None | None |
| SRR513509 | None | None | None | None | None | None | None | None |
| SRR513510 | None | None | None | None | None | None | None | None |
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