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SRR5298791,SRZ5298779,SRZ5298783,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR5298791 | 1017 | Incarnato2017vivo | other | ligation | control | True | 5 | 1 |
| SRZ5298779 | 1018 | Incarnato2017vivo | other | ligation | control | True | 4 | 1 |
| SRZ5298783 | 1019 | Incarnato2017vivo | other | ligation | control | True | 4 | 1 |
| SRZ5298787 | 1020 | Incarnato2017vivo | other | ligation | control | True | 4 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR5298791 | E. coli | organism | whole bacteria | K-12 | |||
| SRZ5298779 | E. coli | organism | whole bacteria | K-12 | |||
| SRZ5298783 | E. coli | organism | whole bacteria | K-12 | |||
| SRZ5298787 | E. coli | organism | whole bacteria | K-12 |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR5298791 | no treatment | None | None | None | |
| SRZ5298779 | no treatment | None | None | None | |
| SRZ5298783 | no treatment | None | None | None | |
| SRZ5298787 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR5298791 | 70 | 21,012,077 | 0.97332 | 0.8914 | 17.6135 | 0.02194 | 5 | 5 |
| SRZ5298779 | 76 | 114,417,177 | 0.91696 | 0.9472 | 6.98888 | 0.07225 | 4 | 3 |
| SRZ5298783 | 76 | 209,748,656 | 0.78949 | 0.8894 | 2.50044 | 0.12608 | 4 | 1 |
| SRZ5298787 | 76 | 232,904,591 | 0.79627 | 0.8854 | 2.51323 | 0.12638 | 4 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR5298791 | None | None | None | None | None | None | None | None |
| SRZ5298779 | None | None | None | None | None | None | None | None |
| SRZ5298783 | None | None | None | None | None | None | None | None |
| SRZ5298787 | None | None | None | None | None | None | None | None |
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