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Sample Details

SRR408117,SRR408118,SRR408119

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR408117	1809	Marazzi2012suppression	GRO-seq	ligation	control	True	4	1
SRR408118	1810	Marazzi2012suppression	GRO-seq	ligation	experimental	False	3	1
SRR408119	1811	Marazzi2012suppression	GRO-seq	ligation	experimental	False	3	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR408117	H. sapiens	cell line	A549
SRR408118	H. sapiens	cell line	A549
SRR408119	H. sapiens	cell line	A549

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR408117	no treatment		None	None	None
SRR408118	treatment	influenza A virus Flag-NS1 (MOI 0.01)	-12 hr	0 hr	12 hr
SRR408119	treatment	influenza A virus Flag-deltaPAF (MOI 0.01)	-12 hr	0 hr	12 hr

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR408117	51	96,519,840	0.84531	0.546	2.54038	0.33746	4	1
SRR408118	51	90,164,686	0.7892	0.5668	2.67921	0.33954	3	1
SRR408119	51	96,183,387	0.68324	0.5119	2.66206	0.39581	3	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR408117	20060	9255	7704	3149	15539	8247	5156	2294
SRR408118	25108	11729	9489	3918	17371	8530	6119	2732
SRR408119	30926	13764	11624	5858	21026	9144	7913	4060