DBNascent | Samples

SRR5034773,SRR5034774,SRR5150535

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR5034773	1927	Ngoc2017human	GRO-seq	ligation	experimental	False	3	1
SRR5034774	1928	Ngoc2017human	GRO-seq	ligation	experimental	False	2	1
SRR5150535	1929	Ngoc2017human	GRO-seq	ligation	control	True	4	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR5034773	H. sapiens	cell line	MCF7
SRR5034774	H. sapiens	cell line	MCF7
SRR5150535	H. sapiens	cell line	MCF7

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR5034773	no treatment		None	None	None
SRR5034774	no treatment		None	None	None
SRR5150535	no treatment		None	None	None

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR5034773	75	20,150,474	0.73617	0.8678	5.69805	0.30879	3	3
SRR5034774	75	28,646,781	0.63354	0.879	3.68356	0.48625	2	2
SRR5150535	75	8,256,611	0.2954	0.8978	2.4767	0.66921	4	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR5034773	32595	9500	13543	9670	29946	10525	11541	8753
SRR5034774	35122	10555	14354	10178	31902	10551	12609	9402
SRR5150535	15920	5955	6682	2544	8045	4879	2255	1102