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SRR7988484,SRR7988486,SRR7988488,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR7988484 | 2413 | Takahashi2020role | PRO-seq | ligation | experimental | False | 2 | 1 |
| SRR7988486 | 2414 | Takahashi2020role | PRO-seq | ligation | experimental | False | 2 | 2 |
| SRR7988488 | 2415 | Takahashi2020role | PRO-seq | ligation | control | True | 2 | 1 |
| SRR7988490 | 2416 | Takahashi2020role | PRO-seq | ligation | control | True | 2 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR7988484 | H. sapiens | cell line | HEK293T | D2G8 | Med26 mut | ||
| SRR7988486 | H. sapiens | cell line | HEK293T | D2G8 | Med26 mut | ||
| SRR7988488 | H. sapiens | cell line | HEK293T | ||||
| SRR7988490 | H. sapiens | cell line | HEK293T |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR7988484 | no treatment | None | None | None | |
| SRR7988486 | no treatment | None | None | None | |
| SRR7988488 | no treatment | None | None | None | |
| SRR7988490 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR7988484 | 76 | 141,481,708 | 0.64887 | 0.8571 | 3.48411 | 0.75434 | 2 | 2 |
| SRR7988486 | 76 | 146,337,667 | 0.54098 | 0.8291 | 4.02151 | 0.79004 | 2 | 2 |
| SRR7988488 | 76 | 163,146,125 | 0.55213 | 0.8667 | 3.80703 | 0.80282 | 2 | 2 |
| SRR7988490 | 76 | 123,007,356 | 0.57948 | 0.8055 | 4.26178 | 0.76134 | 2 | 2 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR7988484 | 35561 | 18300 | 12903 | 4949 | 32608 | 8530 | 14771 | 7524 |
| SRR7988486 | 36965 | 18590 | 12926 | 5931 | 40509 | 8141 | 19437 | 10720 |
| SRR7988488 | 34570 | 19062 | 11498 | 5112 | 43119 | 8690 | 21164 | 11139 |
| SRR7988490 | 33150 | 17933 | 11643 | 4310 | 34237 | 8425 | 15885 | 7830 |
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