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SRR8544024,SRR8544025,SRR8544026,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR8544024 | 2470 | Thomas2019interaction | PRO-seq | ligation | control | False | 2 | 1 |
| SRR8544025 | 2471 | Thomas2019interaction | PRO-seq | ligation | control | False | 1 | 2 |
| SRR8544026 | 2472 | Thomas2019interaction | PRO-seq | ligation | experimental | False | 1 | 1 |
| SRR8544027 | 2473 | Thomas2019interaction | PRO-seq | ligation | experimental | False | 2 | 2 |
| SRR8544028 | 2474 | Thomas2019interaction | PRO-seq | ligation | experimental | False | 3 | 1 |
| SRR8544029 | 2475 | Thomas2019interaction | PRO-seq | ligation | experimental | False | 2 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR8544024 | H. sapiens | cell line | Ramos | Myc-HA fl/fl; tamoxifen-inducible Cre | |||
| SRR8544025 | H. sapiens | cell line | Ramos | Myc-HA fl/fl; tamoxifen-inducible Cre | |||
| SRR8544026 | H. sapiens | cell line | Ramos | Myc Wdr5-interaction-defective fl/fl; tamoxifen-inducible Cre | |||
| SRR8544027 | H. sapiens | cell line | Ramos | Myc Wdr5-interaction-defective fl/fl; tamoxifen-inducible Cre | |||
| SRR8544028 | H. sapiens | cell line | Ramos | Myc truncation fl/fl; tamoxifen-inducible Cre | |||
| SRR8544029 | H. sapiens | cell line | Ramos | Myc truncation fl/fl; tamoxifen-inducible Cre |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR8544024 | treatment | hydroxytamoxifen (20 nM) | -24 hr | 0 hr | 1 day |
| SRR8544025 | treatment | hydroxytamoxifen (20 nM) | -24 hr | 0 hr | 1 day |
| SRR8544026 | treatment | hydroxytamoxifen (20 nM) | -24 hr | 0 hr | 1 day |
| SRR8544027 | treatment | hydroxytamoxifen (20 nM) | -24 hr | 0 hr | 1 day |
| SRR8544028 | treatment | hydroxytamoxifen (20 nM) | -24 hr | 0 hr | 1 day |
| SRR8544029 | treatment | hydroxytamoxifen (20 nM) | -24 hr | 0 hr | 1 day |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR8544024 | 75 | 116,990,287 | 0.56984 | 0.8876 | 2.83043 | 0.73446 | 2 | 1 |
| SRR8544025 | 75 | 107,651,535 | 0.47682 | 0.8855 | 2.66291 | 0.76304 | 1 | 1 |
| SRR8544026 | 75 | 111,033,417 | 0.47539 | 0.8762 | 2.9262 | 0.75132 | 1 | 1 |
| SRR8544027 | 75 | 171,825,691 | 0.64453 | 0.8882 | 2.71504 | 0.74381 | 2 | 1 |
| SRR8544028 | 75 | 113,790,148 | 0.71111 | 0.8665 | 2.92396 | 0.66443 | 3 | 1 |
| SRR8544029 | 75 | 199,714,614 | 0.61679 | 0.871 | 2.7426 | 0.74425 | 2 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR8544024 | 30575 | 13475 | 12121 | 5454 | 33397 | 7337 | 16738 | 8087 |
| SRR8544025 | 29290 | 12461 | 11656 | 5528 | 33540 | 7362 | 16849 | 8371 |
| SRR8544026 | 31389 | 13912 | 12094 | 5825 | 36055 | 7270 | 18377 | 9119 |
| SRR8544027 | 29337 | 12441 | 11794 | 5289 | 36865 | 7268 | 18529 | 9857 |
| SRR8544028 | 27604 | 11466 | 11694 | 4687 | 28770 | 7652 | 13992 | 6292 |
| SRR8544029 | 29842 | 13055 | 11924 | 5350 | 43713 | 7197 | 22503 | 12516 |
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