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Dukler2017nascent
| SRR5364303 |
| SRR5364304 |
| SRR5364305 |
| SRR5364306 |
| SRR5364307 |
| SRR5364308 |
| SRR5364309 |
| SRR5364310 |
| SRR5364311 |
| SRR5364312 |
| SRR5364313 |
| SRR5364314 |
| All metadata | TXT | 12 Kb |
| TDFs (visualization files) | ZIP archive | 1.6 Gb |
| Read counts and bidirectional calls | ZIP archive | 104 Mb |
| SRP accession | SRP102240 |
| GEO accession | GSE96869 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | D. melanogaster |
| Published | Yes |
| Year | 2017 |
| First Author | Dukler |
| Last Author | Siepel |
| DOI | 10.1101/gr.222935.117 |
| Full citation | Noah Dukler, Gregory T. Booth, Yi-Fei Huang, Nathaniel Tippens, Colin T. Waters, Charles G. Danko, John T. Lis, and Adam Siepel. Nascent RNA sequencing reveals a dynamic global transcriptional response at genes and enhancers to the natural medicinal compound celastrol. Genome Research, 27(11):1816-1829, 2017. |
|
Median QC score
|
1.0 |
| ATAC-seq? | No |
| RNA-seq? | No |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |