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Paper Details
Fonseca2019diverse
| SRR6837045 |
| SRR6837046 |
| SRR6837047 |
| SRR6837048 |
| TDFs (visualization files) | Zip archive | 136 Mb |
| Read counts and bidirectional calls | Zip archive | 25 Mb |
| SRP accession | SRP135713 |
| GEO accession | GSE111855 |
| Protocol | GRO-seq |
| Organisms | M. musculus |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2019 |
| First Author | Fonseca |
| Last Author | Glass |
| DOI | 10.1038/s41467-018-08236-0 |
| Full citation | Gregory J. Fonseca, Jenhan Tao, Emma M. Westin, Sascha H. Duttke, Nathanael J. Spann, Tobias Strid, Zeyang Shen, Joshua D. Stender, Mashito Sakai, Verena M. Link, Christopher Benner, and Christopher K. Glass. Diverse motif ensembles specify non-redundant DNA binding activities of AP-1 family members in macrophages. Nature Communications, 10(1):414, 2019. |
|
Median QC score
|
3.5 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |