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Paper Details
Jin2014chem
| SRR1192053 |
| SRR1192054 |
| SRR1192055 |
| SRR1192056 |
| TDFs (visualization files) | Zip archive | 419 Mb |
| Read counts and bidirectional calls | Zip archive | 32 Mb |
| SRP accession | SRP040117 |
| GEO accession | GSE55903 |
| Protocol | GRO-seq |
| Organisms | H. sapiens |
| Library Prep | circularization |
| Spike-in | |
| Published | Yes |
| Year | 2014 |
| First Author | Jin |
| Last Author | Rosenfeld |
| DOI | 10.1073/pnas.1404303111 |
| Full citation | Chunyu Jin, Liuqing Yang, Min Xie, Chunru Lin, Daria Merkurjev, Joy C. Yang, Bogdan Tanasa, Soohwan Oh, Jie Zhang, Kenneth A. Ohgi, Hongyan Zhou, Wenbo Li, Christopher P. Evans, Sheng Ding, and Michael G. Rosenfeld. Chem-seq permits identification of genomic targets of drugs against androgen receptor regulation selected by functional phenotypic screens. Proceedings of the National Academy of Sciences USA, 111(25):9235-9240, Jun 2014. |
|
Median QC score
|
2.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | Yes |
| 3D Seq? | No |
| Other Seq? | No |