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Paper Details
Khodor2011nascent
| TDFs (visualization files) | Zip archive | 291 Mb |
| Read counts and bidirectional calls | Zip archive | 2 Mb |
| SRP accession | SRP008848 |
| GEO accession | GSE32950 |
| Protocol | RNA-seq variant |
| Organisms | D. melanogaster |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2011 |
| First Author | Khodor |
| Last Author | Rosbash |
| DOI | 10.1101/gad.178962.111 |
| Full citation | Yevgenia L. Khodor, Joseph Rodriguez, Katharine C. Abruzzi, Chih-Hang Anthony Tang, Michael T. Marr, and Michael Rosbash. Nascent-seq indicates widespread cotranscriptional pre-mRNA splicing in Drosophila. Genes and development, 25(23):2502-2512, 2011. |
|
Median QC score
|
3.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |