Woo2018ted
Downloads (all samples in dataset)
All metadata TXT 4 Kb
TDFs (visualization files) ZIP archive 671 Mb
Read counts and bidirectional calls ZIP archive 36 Mb
Paper Details
SRP accession SRP117282
GEO accession GSE103719
Protocol PRO-seq
Organisms H. sapiens
Library Prep ligation
Spike-in
Published Yes
Year 2018
First Author Woo
Last Author Kwak
DOI 10.1016/j.celrep.2018.08.084
Full citation Yu Mi Woo, Yeonui Kwak, Sim Namkoong, Katla Kristjansdottir, Seung Ha Lee, Jun Hee Lee, and Hojoong Kwak. Ted-seq identifies the dynamics of poly(a) length during ER stress. Cell reports, 24(13):3630-3641, 2018.
Median QC score
Information
1.0
ATAC-seq? No
RNA-seq? Yes
ChIP-seq? No
3D Seq? No
Other Seq? Yes