Nelson2018ppar
Downloads (all samples in dataset)
All metadata TXT 6 Kb
TDFs (visualization files) ZIP archive 364 Mb
Read counts and bidirectional calls ZIP archive 34 Mb
Paper Details
SRP accession SRP133563
GEO accession GSE111103
Protocol GRO-seq
Organisms M. musculus
Library Prep circularization
Spike-in
Published Yes
Year 2018
First Author Nelson
Last Author Lazar
DOI 10.1101/gad.312355.118
Full citation Victoria L. Nelson, Hoang C.B. Nguyen, Juan C. Garcia-Canaveras, Erika R. Briggs, Wesley Y. Ho, Joanna R. DiSpirito, Jill M. Marinis, David A. Hill, and Mitchell A. Lazar. PPARgamma is a nexus controlling alternative activation of macrophages via glutamine metabolism. Genes and Development, 32(15-16):1035-1044, 2018.
Median QC score
Information
2.0
ATAC-seq? No
RNA-seq? Yes
ChIP-seq? Yes
3D Seq? No
Other Seq? No